robinjugas Goto Github PK
Name: Robin Jugas
Type: User
Robin Jugas's Projects
chromosomemappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
cnogpro
:exclamation: This is a read-only mirror of the CRAN R package repository. CNOGpro — Copy Numbers of Genes in prokaryotes
cnproscan
CNV detection for prokaryote genomes using NGS sequencing data
cnproscanmatlab
CNproScan - Matlab version
cross-correlation-based-detection-of-contigs-overlaps
Scripts for IEEE MIPRO 2018 Conference paper
exomecnvpipeline
exomeCNVpipeline
gc_assembly
mageckflute
Integrative analysis pipeline for pooled CRISPR functional genetic screens
overlap-detection-for-a-genome-assembly-based-on-genomic-signal-processing
Script for IEEE CBMS paper 2017
overlapdetectionbygsp
Overlap detection for genome assembly based on genomic signal processing
pipelineforepigeneticprofiling
Dataset of Epigenetic profiles of pediatric oncology tumors
procaryasv
An ensemble structural variant calling pipeline driven by snakemake using multiple SV and CNV callers.
wshpackage
R package for the calculation of the following Within-Sample Heterogeneity Scores in Bisulfite Sequencing Data: FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL
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