Comments (4)
Relates to #19 in that it refers to an input of biomass()
. It is likely that, as we learn more about the data we collect, we will decide that we need more inputs. (I may need to create a label more specific than "code" to refer to inputs. But right now it seems to early for that.)
from allodb.
To close this issue, I will do the following:
-
update the current wsg table in allodb. It will include all ForestGEO sites with public species list.
I proposed this so there is a WD table in allodb that can be sourced when needed by fgeo.biomass.
Please @teixeirak need to confirm if this is correct. -
use the gewWodDensity function from BIOMASS to get values from Zanne et al 2009 for all species in our list.
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incorporate WD values contributed from PI' (Joe W: Yasuni-Panama-Pasoh; Diego Rodriguez: Heishiding)
from allodb.
Two questions here:
1- structurally, do we want to include all these species in the site-species table, then link to the WD table? I think that was the original plan.
2- Do we gain much by retrieving those values now? We gain some speed, but I believe BIOMASS uses data from the wood density database to estimate uncertainty.
3- Also, if we retrieve wood density values now, we would need to ensure that they get overridden when new values are added to the database.
All together, maybe just include wood density values that we have specifically for ForestGEO sites, at least for now?
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Closing issue because we no longer work with tropical allometries
from allodb.
Related Issues (20)
- Replace data.frame() with tibble()
- When calling stop() use call. = FALSE
- some commits not showing
- Increase test coverage
- Tidy allodb::equations in advance, not in new_equaions()
- Prune data-raw/ HOT 1
- Remember to review FIXME and TODO
- Simplify new_equations()
- Ensure error messages wrap nicely
- Remove needless calls to print() in examples
- Use simpler markdown syntax, e.g. replace \pkg{allodb} with *allodb*
- Review punctuation of helpfiles (title and other sections)
- Use simple comments to follow tidyverse styleguide "# blah" not "## blah"
- Reserve return() for early returns (tidyverse styleguide)
- Remove redundant reference to allodb
- Remove duplication in documentation
- Replace references to `f()` with [f()].
- Document default vaules in signature, not in `@param` or elsewhere
- If `coords` has wrong dimensions `get_biomass()` should throw an error HOT 2
- Support for the component ratio method HOT 1
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