Comments (12)
richelbilderbeek
commented on June 16, 2024
It appears you are forbidden to download files?
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richelbilderbeek
commented on June 16, 2024
Try utils::download.file on some other file 👍.
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thijsjanzen
commented on June 16, 2024
Try
utils::download.fileon some other file 👍.
This works perfectly:
utils::download.file("http://www.thijsjanzen.nl/The%20Neutralizer%201.31.exe", destfile = "test.exe")```
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richelbilderbeek
commented on June 16, 2024
Hmmm, will restart a Travis build to see if indeed something is wrong.
For me, locally, everything works fine:
richel@sonic:~$ Rscript -e "beastier::uninstall_beast2()"
[1] TRUE
richel@sonic:~$ Rscript -e "beastier::install_beast2()"
trying URL 'https://github.com/CompEvol/beast2/releases/download/v2.5.2/BEAST.v2.5.2.Linux.tgz'
Content type 'application/octet-stream' length 8390602 bytes (8.0 MB)
==================================================
downloaded 8.0 MB
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richelbilderbeek
commented on June 16, 2024
Travis build passed again, ergo I cannot reproduce the error.
Have you tried running beastier::install_beast2 again?
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thijsjanzen
commented on June 16, 2024
Travis build passed again, ergo I cannot reproduce the error.
Have you tried running
beastier::install_beast2again?
still same same.
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richelbilderbeek
commented on June 16, 2024
Hmmm, I wonder what the results of these are:
beastier::install_beast2(verbose = TRUE)and
rappdirs::app_dir()$osboth run on the target platform. Could you share the name of this magic target platform?
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thijsjanzen
commented on June 16, 2024
Hmmm, I wonder what the results of these are:
beastier::install_beast2(verbose = TRUE)
> beastier::install_beast2(verbose = TRUE)
[1] "Operating system: unix"
[1] "Download from URL: https://github.com/CompEvol/beast2/releases/download/v2.5.2/BEAST.v2.5.2.Linux.tgz"
downloaded 0 bytes
Error in utils::download.file(url = url, destfile = local_path) :
cannot download all files
In addition: Warning message:
In utils::download.file(url = url, destfile = local_path) :
URL 'https://github-production-release-asset-2e65be.s3.amazonaws.com/15949777/195f6580-2aaa-11e9-9ba5-3f6739d075c1?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=AKIAIWNJYAX4CSVEH53A%2F20190604%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20190604T080330Z&X-Amz-Expires=300&X-Amz-Signature=da077bbc90362b15db1c2f6b1475664bacbc0ccc0be1c7b368df6a32607353e9&X-Amz-SignedHeaders=host&actor_id=0&response-content-disposition=attachment%3B%20filename%3DBEAST.v2.5.2.Linux.tgz&response-content-type=application%2Foctet-stream': status was '403 Forbidden'
and
rappdirs::app_dir()$os
rappdirs::app_dir()$os
[1] "unix"
both run on the target platform. Could you share the name of this magic target platform?
This is on the CARL cluster of the University of Oldenburg.
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richelbilderbeek
commented on June 16, 2024
Then I predict this won't work either:
utils::download.file(url = "https://github.com/CompEvol/beast2/releases/download/v2.5.2
/BEAST.v2.5.2.Linux.tgz", destfile = "irrelevant")On my computer:
trying URL 'https://github.com/CompEvol/beast2/releases/download/v2.5.2/BEAST.v2.5.2.Linux.tgz'
Content type 'application/octet-stream' length 8390602 bytes (8.0 MB)
==================================================
downloaded 8.0 MB
>
What will this give on yours?
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thijsjanzen
commented on June 16, 2024
/BEAST.v2.5.2.Linux.tgz", destfile = "irrelevant")
You predicted right
> utils::download.file(url = "https://github.com/CompEvol/beast2/releases/download/v2.5.2/BEAST.v2.5.2.Linux.tgz", destfile = "irrelevant")
downloaded 0 bytes
Error in utils::download.file(url = "https://github.com/CompEvol/beast2/releases/download/v2.5.2/BEAST.v2.5.2.Linux.tgz", :
cannot download all files
In addition: Warning message:
In utils::download.file(url = "https://github.com/CompEvol/beast2/releases/download/v2.5.2/BEAST.v2.5.2.Linux.tgz", :
URL 'https://github-production-release-asset-2e65be.s3.amazonaws.com/15949777/195f6580-2aaa-11e9-9ba5-3f6739d075c1?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=AKIAIWNJYAX4CSVEH53A%2F20190604%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20190604T083004Z&X-Amz-Expires=300&X-Amz-Signature=bd9206831b9b9d9f9700c5bfeae35d8590ff5d1e9133a56e40f8dc53a3293d43&X-Amz-SignedHeaders=host&actor_id=0&response-content-disposition=attachment%3B%20filename%3DBEAST.v2.5.2.Linux.tgz&response-content-type=application%2Foctet-stream': status was '403 Forbidden'
>
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richelbilderbeek
commented on June 16, 2024
Sounds like you have no rights to download from that URL on CARL. No idea why the sysadmin blocks that URL or prevents you from doing so...
What is clear, however, is that this Issue has nothing to do with beastier.
I'll close this Issue after some days, in case you want to add some notes to yourself below.
Thanks for the report 👍
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richelbilderbeek
commented on June 16, 2024
Time to close 🌈
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Related Issues (20)
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