Comments (3)
DomBennett
commented on June 22, 2024
Hi,
This looks like an error to do with Windows and the BLAST+ which the R code is not calling correctly. @hettling do you have ready access to a Windows machine to test this out? (I need to sort one out for myself to check for these sorts of errors.)
Dom
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DomBennett
commented on June 22, 2024
Hi @jgomezd,
Are you still having problems with this? I've managed to get a hold of a windows machine and was able to successfully run the pipeline for the ferns.
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DomBennett
commented on June 22, 2024
Closing due to inactivity.
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Related Issues (20)
- problem with the restez/phylota integration
- Possibility to supply NCBI API key when running pipeline to access NCBI data faster? HOT 1
- Use phylotaR for retrieving orthologous protein sequences HOT 1
- No periods or tildes in file paths HOT 3
- Multiple markers/loci per cluster issue HOT 4
- Can not install the package in windows HOT 2
- Clusters with different parent number but the same MAD, seed, length, n_taxa, n_seqs
- Description - not enough information
- New Maintainer Wanted HOT 5
- Next release HOT 6
- CRAN archive of package outsider
- Fix pkgdown configuration for reference HOT 3
- No need for restez_connect() HOT 1
- Remove treeman as a dependency? HOT 2
- Could get something new from https://github.com/pachterlab/gget
- test failure HOT 1
- Generating taxonomic dictionary error HOT 1
- Fetch and error seem to be stuck HOT 2
- drop taxa functionality HOT 1
- Identical clusters making it into alignments HOT 1
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