Comments (2)
Dear Willov,
Indeed there was a format change in Signor, previously they used a semicolon now they have tabs in their table. I updated accordingly, 0.7.59 (or latest git) should work. I hope it works for you and thanks for spotting this.
The settings.separator
is None
because the data here is preprocessed by another method (pypath.dataio.signor_interactions()
) so when building the network we already don't need to care about the separator.
Best,
Denes
from pypath.
Great job, really quick!
I pulled the changes and it seems to be working correctly now.
I will keep testing, and report new issues if I spot any!
from pypath.
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