sampearl Goto Github PK
Name: Sam Pearlman
Type: User
Company: Myriad Women's Health
Bio: Bioinformatics Scientist, Data Analyst, Computer Scientist
Location: South San Francisco, CA
Blog: http://www.myriad.com/
Sam Pearlman's Projects
biocommons.seqrepo
non-redundant, compressed, journalled, file-based storage for biological sequences
flake8-functions
flake8 plugin for validation of function parameters (length, complexity, etc)
pygithub
Typed interactions with the GitHub API v3
pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
stor
A cross-compatible CLI and Python API for accessing block and object storage
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