Comments (3)
lbarquist
commented on June 3, 2024
Hi,
I haven't seen this error before. Could you email me your input files (i.e. controlsLB.txt, conditionsM9.txt, and the tab files listed in these) so I can take a look at what's going on? Obviously these will be kept confidential. My email is [email protected]
Thanks,
Lars
from bio-tradis.
lbarquist
commented on June 3, 2024
For posterity's sake: this is due to POD documentation lines that are added during the system installation of these scripts, possibly due to handling by cpan? These do not affect the results of these scripts, but should be fixed.
from bio-tradis.
andrewjpage
commented on June 3, 2024
Thanks for letting us know. I've updated the CPAN module so that it doesnt add PERL documentation lines to the bottom of R scripts! Version 1.3.1 should be available from CPAN in the next few hours.
from bio-tradis.
Related Issues (20)
- How to deal with biological replicates - tradis_essentiality.R HOT 4
- installing biotradis on MacOS HOT 4
- test failures with samtools v1.10 HOT 1
- Essentiality analysis code HOT 4
- ftp download link in biotradistutorial.pdf no longer exists
- Possible issue with calculation of read start and ends in module Cigar.pm HOT 2
- Problem with insertion plots (files longer than they should be) HOT 9
- tradis_essentiality.R output a file containing change points?
- tradis_comparison issue HOT 3
- -mm paramater not working as expected HOT 1
- Unable to install biotradis
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- Issues on running BioTraDIS on multiple contigs HOT 1
- cpan update? HOT 1
- Installing Bio-Tradis Fail HOT 6
- Duplicate genes HOT 4
- Port 18 volume discrepancy? HOT 6
- Installation on Ubuntu 17.10 fails HOT 2
- Using Bio-Tradis to analyze mariner-transposon library HOT 8
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