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adtools

Experimental GNU toolchain for AmigaOS

adtools-docker

A simple dockerfile for building ppc-amigaos applications

amitools

Various tools for using AmigaOS programs on other platforms

atari800

Atari 8-bit computer and 5200 console emulator

benchmarks

Few benchmarks.

bio-ontology-zp

Automated construction of a phenotype ontology for zebrafish

biozim

A simulator for SBML networks

boqa

Bayesian Ontology Query Algorithm (BOQA)

cdt

Development of some potential contributions for CDT (note that branches will be rebased regulary!)

charite.github.io

Charité Computational Biology Website

clib2

Olaf Barthel's clib2 project from https://sourceforge.net/projects/clib2/ with few changes

clib2-1

An ISO 'C' (1994) compliant runtime library for Amiga systems...

clperf

A command line tool to for evaluating classifier performance

concretize-java

degl

Deglobalize variables in C or C++ source code

docopt.c

C-code generator for docopt language.

gcc-accel-docker

A dockerfile demonstrating how to get an accelerator-offloading-enabled gcc

genopts

Simple command line argument parser generator

gild

Managing patches via git

gitunify

hugo

A Fast and Flexible Static Site Generator built with love in GoLang

interim-openssl

An interim OpenSSL port for AmigaOS

jcommander

Command line parsing framework for Java

libgit2

The Library

maven-plugins

Mirror of Apache Maven plugins

mgsa-bioc

Mirror of the mgsa Bioconductor package with full history in the master branch. Content of https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mgsa in the bioconductor branch.

moodletools

Command-line tools for controlling a Moodle instance (non-admin)

mvn-repo

A Maven repository containing miscellaneous artifatcs

ninox-maven-plugin

The ninox-maven-plugin shall allow one to build OBO or OWL ontologies. It is intended to be a wrapper for OOrt of the owltools project, but bringing the features of Maven namely structure by convention, dependency resolution, modularity, testing, and deploying also to ontology development.

ontologizer

Ontologizer is a tool for identifying enriched Gene Ontology terms in lists of names of genes or gene products.