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sbslee avatar sbslee commented on August 22, 2024

@rupesh-sinha,

Great questions! As for the first question, you can simply make the figure bigger with, say, figsize=(20, 20). This should spread things out.

As for the other question, congratulations, you found a bug! I will try to fix this issue in the next release (1.16.0).

Thanks for reporting the issues.

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sbslee avatar sbslee commented on August 22, 2024

https://stackoverflow.com/questions/71871308/seaborn-clustermap-and-multiple-color-labeling-of-columns

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sbslee avatar sbslee commented on August 22, 2024

@rupesh-sinha,

FYI, the bug has been fixed in the 1.16.0-dev branch. I will release the official version soon, but in the meantime you are welcome to try it out!

import dokdo
import matplotlib.pyplot as plt
%matplotlib inline
import seaborn as sns
sns.set()
qza_file = '/Users/sbslee/Desktop/dokdo/data/moving-pictures-tutorial/table.qza'
metadata_file = '/Users/sbslee/Desktop/dokdo/data/moving-pictures-tutorial/sample-metadata.tsv'

dokdo.clustermap(qza_file,
                 metadata=metadata_file,
                 normalize='clr',
                 hue1='body-site',
                 hue2='subject')

without-flip

dokdo.clustermap(qza_file,
                 metadata=metadata_file,
                 normalize='clr',
                 flip=True,
                 hue1='body-site')

with-flip

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