Comments (2)
There currently is no release candidate out of anndata, so I don't think that error is related to anndata.
It does look like that job is pulling in a release candidate of numba, which I suspect may be the culprit: anndata-0.10.3
, numba-0.59.0rc1
I'm going to close this since the other jobs using the same version of anndata seem to work, but can re-open if I'm missing something.
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I reported it upstream to pynndescent. @ivirshup you were correct and I was blind, sorry.
from anndata.
Related Issues (20)
- Saving .h5ad with pd.Series in .uns results in IORegistryError HOT 3
- `read_elem_as_dask` HOT 8
- `FileNotFoundError: [Errno 2] No such file or directory: 'llvm-config'` on CI HOT 2
- Upcoming Scipy 1.13 incompatible with file-backed sparse matrices
- CZI files' `var` count changd
- `/` in column names makes AnnData Zarr object unreadable on windows HOT 12
- String indexes in var lead to UserWarning HOT 1
- Move tests out of the package
- Refactor `BaseCompressedSparseDataset` and subclasses to remove `backed_{csr,csc}_matrix`
- concat_on_disk should use int64 indptrs by default so that it can concatenate large files HOT 4
- TypeError: Can't implicitly convert non-string objects to strings HOT 4
- Error concatenating scRNA with visium dataset
- Error: Expected a python object, received a character HOT 1
- memory usage of concat HOT 3
- Using `Pint` for units HOT 9
- UMAP of gene subset of adata HOT 1
- Error using sc.pl.stacked_violin HOT 1
- NotImplementedError with concat_on_disk
- Issue when setting anndata.X to numpy array HOT 3
- Does anndata.raw can be automatically modified after define it?
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