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devclinton avatar devclinton commented on July 19, 2024

When you restarted RStudio via Docker, did you run the following sequence?

export UID=$UD docker-compose up -d

Also, the following should work as well
UID=$UID docker-compose up -d

The docker image has user-level permissions and the export UID=$UID or the UID=$UID portions of the commands above pass the current user is to the image to properly map the permissions between host and container. My best guess is you ran without doing the export first. If you open a terminal up and then
cd /home/rstudio/seattle_flu touch test_permissions
If the touch command fails, it is the UID issues.
If the above commands succeeds, then the container permissions are not the issue. In that case, it could be the project file has the wrong permissions. I would check the project by doing the following on your host(not in the container). The first command could have wrong path but basically navigate to your git checkout through ssh.
cd ~/incidence-mapper/u/dbViewR ls -al
image

If the project file is not owned by you, run the following. Replace user with the your linux user name. I usually use the one from the ls -al output.
sudo chown <user>:<group> dbViewR.Rproj

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famulare avatar famulare commented on July 19, 2024

Yep, forgot export UID=$UD docker-compose up -d.

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