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cello

A string library

clinvarome

Project code to generate a comprehensive annotated clinvarome from variant alert outputs

clinvcf

Generate an enhanced VCF files from ClinVar XML Full releases

docopt.nim

Command line arguments parser that will make you smile (port of docopt to Nim)

genomealert_app

Shiny app of Genome Alert! explorations.

go-tus

A pure Go client for the tus resumable upload protocol

hmmer

HMMER: biological sequence analysis using profile HMMs

hts-nim

nim wrapper for htslib for parsing genomics data files

kraf

Kmer based Recalibration of Allele Frequency

mosdepth

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

technical_test_stanislas

tusd

Reference server implementation in Go of tus: the open protocol for resumable file uploads

variant_alert

Variant Alert!, a framework to monitor every significant alteration in variant classification and gene-disease association between two versions of ClinVar database.

vt

A tool set for short variant discovery in genetic sequence data.

yq

yq is a portable command-line YAML processor