shangguandong1996 Goto Github PK

acl4ssr

SSR 去广告ACL规则/SS完整GFWList规则，Telegram频道订阅地址

atac-pipe

Analysis pipeline for ATAC-seq Data

awesome-bioinformatics-benchmarks

A curated list of bioinformatics bench-marking papers and resources.

bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

bioinfo.github.io

bioinfoplottk

cdna_cupcake

Miscellaneous collection of Python and R scripts for processing Iso-Seq data

deq

An R package to conveniently run DESeq2, edgeR, and QNB for the detection of differential methylation in MeRIP/m6A-seq data.

embryotimecourse2018

Data and analysis scripts for our Embryo Timecourse paper.

erythroid-profiling

Analysis repository for Erythropoiesis ATAC/RNA profiling paper

findit2

findit2_paper_relatedcode

ggmsa

:traffic_light: Visualizing publication-quality multiple sequence alignment using ggplot2

ggsignifnew

Taking original ggsignif and adding FDR from sidderb

gray2017elife

in-depth-ngs-data-analysis-course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

interactivecomplexheatmap

Make Interactive Complex Heatmaps

interactivefindit2

microbial-interkingdom-suppl

Scripts and tables for Duran & Thiergart et al. 2018 (unpublished)

mito-genotyping

Repo for scripts for Ludwig et al mtDNA genotyping

myown_chip_seq_manual

myownblog_datalink

This is the data repo of myOwnBlog

myrepo

testing my setup

mytest

picture_link

biostar or biocondtuctor picture link

r-basic

基础入门课

r-loop-project

The project is from my biostatistic class at University of Texas, Austin. The goal is to use statistic analysis in R programming to evaluate published data set.

remapenrich

ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, automate and plot the enrichment analysis for genomic regions.

rootaltas

source code of http://wanglab.sippe.ac.cn/rootatlas/

script_chip