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Name: Scott Teresi
Type: User
Company: Michigan State University
Bio: PhD student in the Edger Lab at Michigan State University. Author of TE Density.
Twitter: ScottyTeresi
Location: Lansing, MI
Name: Scott Teresi
Type: User
Company: Michigan State University
Bio: PhD student in the Edger Lab at Michigan State University. Author of TE Density.
Twitter: ScottyTeresi
Location: Lansing, MI
Examine changes in gene expression and network/pathway structure in northern highbush blueberry (Vaccinium coymbosum) following gall wasp infection - by Scott Teresi
Perform an RNA-Seq alignment, quantify gene expression, and determine differentially expressed genes
TE differences of syntelogs in wild strawberry
Publication: https://www.nature.com/articles/s41467-023-43740-y
TE annotations for various Fragaria genomes using EDTA
By Scott Teresi, generate gene expression values and differential gene expression data for grape
Scotts dotfiles
Personal Website
Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4
Transposon Density for H4 and Camarosa
Repository to store templates, guides, and presentations
Publication: https://doi.org/10.1093/hr/uhad202
TE Annotation code for W85 (diploid blueberry) genome.
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