CLARIFICATION: What is limiting UNCALLED from being evaluated for r9.4.1? about uncalled HOT 4 CLOSED

UNCALLED works with r9.4.1. The signal characteristics are equivalent to r9.4, and UNCALLED has actually mainly been tested using r9.4.1 data. I'll update the README to reflect that.

If you have an ONT community account, you can find a slightly more in-depth answer here: https://community.nanoporetech.com/posts/a-minor-revision-to-r9-4-a-2108

from uncalled.

@skovaka, thanks this helps. One last thing, did you observe 5mer model performs better than 6mer model or were they equivalent for event detection?

from uncalled.

They are pretty much equivalent. If you look at the means for 6-mers that have a 5bp suffix/prefix match you'll see they're nearly identical, indicating the 6th base doesn't add much information.

from uncalled.

Thank you @skovaka

from uncalled.