smeeta Goto Github PK
Name: Shrestha
Type: User
Company: LKC School of Medicine
Bio: Integrating genomics with epidemiology to address translational healthcare.
Twitter: smeetashrestha
Location: Singapore
Name: Shrestha
Type: User
Company: LKC School of Medicine
Bio: Integrating genomics with epidemiology to address translational healthcare.
Twitter: smeetashrestha
Location: Singapore
A curated list of awesome Bioinformatics libraries and software.
bioBakery tools for meta'omic profiling
An ultrafast memory-efficient short read aligner
DMRcate Tim Peters
Quality control on genetic variants from next-generation sequencing data using random forest
Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools
Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
The second version of the Kraken taxonomic sequence classification system
Kraken output generates a report for each datasets, this script takes these individual output and combines it to one file, where each column is number of reads that were rooted to this taxon (column 2 in summary)
This is the development fork - Stable code has been moved to ==>
STAR based ENCODE Long RNA-Seq processing pipeline
Efficient algorithms for analyzing DNA methylation data.
R package for MetaboAnalyst
R package for searching, downloading and analysis of EBI MGnify metagenomics data
Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
multiPhATE with comparative genomics
NGS-pipe: next-generation sequencing pipelines for precision oncology
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Tools (written in C using htslib) for manipulating next-generation sequencing data
Sankey Plot script from davidsjoberg github
This repo is for demonstration purposes only.
Generating pipeline to analyse test data set
Tools to work with variant call format files
Git class
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.