smeisler Goto Github PK

2021_08_wang_load-confounds

Proceeding for `load_confounds` at brainhack MTL 2020

awesome-cv

:page_facing_up: Awesome CV is LaTeX template for your outstanding job application

bayesfmri

BayesfMRI R package

bids-specification

Brain Imaging Data Structure (BIDS) Specification

ciftitools

ciftiTools R package

confixel

Convert Fixels back and forth from h5 files!

dcm2bids

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

fitlins

Fit Linear Models to BIDS Datasets

fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

freesurfer_tabulate

Gathering/Creating annot files and using them to get tsvs

fsub_extractor

Software that functionally segments white matter connections to generate task-specific subcomponents of fiber bundles.

google-scholar-for-github-pages

This is a Jekyll include file that pulls from a Google Scholar csv file to output and format your publications

hcp2bids

To convert Human Connectome projects(HCP) data to BIDS std

load_confounds

Load fMRIprep confounds in python

markdown

A Python implementation of John Gruber’s Markdown with Extension support.

meisler_reading_fba

Code used in the Meisler and Gabrieli 2022 eLife paper on fixel based analyses of reading abilities.

meisler_readingfa_associations

Code used in Meisler and Gabrieli 2022

meisler_readingint_dwi

Code used in the Meisler, Gabrieli, and Christodoulou 202X paper on DWI correlates of reading intervention.

modelarray

ModelArray: a memory-efficient R package for statistical analysis of fixel data (modified for surface-based morphometry)

moderncv

A modern curriculum vitae class for LaTeX

nilearn

OHBM work space

pymvpa

runs MVPA and RSA analysis BIDS bold derivative data

qsiprep

Preprocessing and reconstruction of diffusion MRI

rbx_flow

sdcflows

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes

smeisler

Config files for my GitHub profile.

smeisler.github.io

🎓🏫 Steven Meisler's website, originally forked from mmistakes/minimal-mistakes

smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

synbold-disco

Synthetic BOLD images for distortion correction of fMRI without additional calibration scans

synthstrip

Synthstrip integration to be used across nipreps