smw1414 Goto Github PK

2016-1

algorithm-archive

A collaborative book on algorithms

atac-seq-pipeline

ENCODE ATAC-seq pipeline

awesome-cancer-variant-databases

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-multi-omics

List of software packages for multi-omics analysis

awesome-r

A curated list of awesome R packages, frameworks and software.

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bam_matcher_docker

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bcl2fastq-docker-aurora

circlncrnanet

An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs

covcalc

Coverage / read count calculator for sequencing experiments

deeplearning-biology

A list of deep learning implementations in biology

deeplearningproject

An in-depth machine learning tutorial introducing readers to a whole machine learning pipeline from scratch.

delfi_scripts

deviumweb

Interactive multivariate data analysis in R implemented in shiny.

docker-bcl2fastq

Dockerfile for Illumina bcl2fastq

genvisr

Genome data visualizations

good.software

This is the GitHub repository for our recent study "A comprehensive analysis of the usability and archival stability of omics computational tools and resources." Please follow to the repository's wiki for more information and details on how this repository is connected to the paper.

idep

iDEP: integrated Differential Expression & Pathway analysis

ieditdb

interpretable-ml-book

Book about interpretable machine learning

learn_python_for_a_r_user

2017 IT 邦幫忙鐵人賽

lineagem_bot

天堂M 外掛

malva

genotyping by Mapping-free ALternate-allele detection of known VAriants

msk-grail-techval

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

multimodal-scrna-seq

Figure depicting the breadth of multimodal scRNA-seq technologies

na12878

Data and analysis for NA12878 genome on nanopore

nlp-roadmap

ROADMAP(Mind Map) and KEYWORD for students those who have interest in learning NLP