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spatial-time-r's Projects

cdcfluview icon cdcfluview

:mask: R package to Retrieve U.S. Flu Season Data from the CDC FluView Portal (WHO & ILINet)

denvclimate icon denvclimate

:thermometer: Modelling the impacts of temperature on dengue transmissions

epinow icon epinow

Estimate Realtime Case Counts and Time-varying Epidemiological Parameters

huskydown icon huskydown

An R Markdown template using the bookdown package for preparing a PhD thesis at the University of Washington

kwb.qmra icon kwb.qmra

QMRA (quantitative microbial risk assessment) for water supply systems

lyx_pnas icon lyx_pnas

LyX template and layout for PNAS, derived from the PNAS Overleaf template

metaflu icon metaflu

Functions for Avian Influenza Metapopulation Simulation

nextflu icon nextflu

Real-time tracking of influenza evolution

rems icon rems

Access Data From British Columbia's Environmental Monitoring System in R

sdplots icon sdplots

This repository contains all published data.

seegsdm icon seegsdm

species distribution modelling code for seeg projects

siminf icon siminf

A framework for data-driven stochastic disease spread simulations

sk.measles icon sk.measles

Code accompanying the manuscript "Estimating contact-adjusted immunity levels against measles in South Korea and prospects for maintaining elimination status".

space-time icon space-time

Analysis of EBOV genome sequence from Guinea, Sierra Leone and Liberia from 2014-2016

spades icon spades

R package for developing and running Spatial Discrete Event Simulation models

spread3 icon spread3

Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3

vaxedemic icon vaxedemic

Optimal global allocation of vaccinations during a pandemic

zika icon zika

Data repository of publicly available Zika data

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