srassmann Goto Github PK
Name: Sebastian Rassmann
Type: User
Company: University Bonn
Bio: Student research assistant @ IGSB Bonn
Twitter: s_rassmann
Location: Bonn, Germany
Blog: https://www.igsb.uni-bonn.de/en/team-1/sebastian-rassmann
Sebastian Rassmann's Projects
area-selector-ciliaq
Plugin allowing for manual definition of Areas of Interest in a Stack in order pre-process images for CiliaQ
bone-age
Bone age assessment using end-to-end Deep Learning
canny3d-thresholder
ImageJ plugin to preform image binarization based on a canny edge detection in 3 dimensions
ciliaq
An ImageJ plugin to quantify ciliary shape, length, and fluorescence.
ciliaq-output-joinr
Template for an R markdown script to bundle and analyze the output from CiliaQ
copy-and-paste-augmentation
Case study for applying a Copy-and-Paste Augmentation for object detection and instance segmentation in zoologic collection boxes
creative-commons-4.0-markdown
Markdown-formatted Creative Commons 4.0 license texts
deeplasia-service
RESTfull service with a simple API to predict bone age from X-rays
hand-segmentation
Different Deep Learning to extract the hand from (scanned) X-ray images
head-motion-from-mri
Code for the paper "Estimating Head Motion from MRI", which predicts motion scores directly from MRI images.
imagej-plugin-template
A simple template for an ImageJ Plugin featuring a framework for multi-file selection and processing
resvit
Official Implementation of ResViT: Residual Vision Transformers for Multi-modal Medical Image Synthesis
shiva_pvs
Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet
shiva_wmh
# White Matter Hyperintensities (WMH) segmentation with a 3D Unet
syndiff
Official PyTorch implementation of SynDiff described in the paper (https://arxiv.org/abs/2207.08208).
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