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assemblyandannotation_pipeline

formation-linux-cluster

Formation en français destinée aux agents du CIRAD sur les commandes unix et l'utilisation du cluster de calcul

funcannotate

kmer_workflow

leaftool

IPSDK macro_interface

leaftool_r

Research on plant leaf diseases requires the acquisition of quantitative data to characterize the symptoms caused by different pathogens. These symptoms are frequently lesions that are differentiated from the leaf blade by their color and texture. Among the variables used to characterize the impact of a disease, the most relevant are the number of lesions per unit of leaf area, the area and the shape of the lesions. Since visual measurements are only possible on small numbers of images, it is necessary to use computerized image analysis procedures. The LeAFtool (Lesion Area Finding tool)

mlg_assign

Multi-Locus Genotypes (MLGs) are frequently used to carry out population genetics of clonal organisms. Tools to assign genotyped individuals to MLGs were integrated in some genetic software. However, these tools usually fail to appropriately deal with missing data.

pibooth

The pibooth project provides a Photo Booth application out-of-the-box for Raspberry Pi

pibooth-pimoroni11x7

plugin for pibooth with use pimoroni led 11x7 for message and flash

pibooth-qrcode

Pibooth plugin to generate a QR code to access to the final the picture

rattlesnp

snakemake workflow for mappind single/paired datas

scripts

snakemake

This is the development home of the workflow management system Snakemake. For general information, see

snakemaketuto

yoda-powers

own usual fonction python import