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Yvonne Zhuang's Projects

cpcg icon cpcg

R package for solving system of linear equations using (preconditioned) conjugate gradient algorithm, with improved efficiency using C++ Armadillo linear algebra library, and flexibility for user-specified preconditioning method.

haprecstr icon haprecstr

a C++ program for haplotype reconstruction using HMM

nact icon nact

Faster Genetic Effect Estimation with Approximated Covariance

sparselmm icon sparselmm

An R package integrated with C++ Armadillo library and OpenMP API with a modified version of SAIGE's `fitNULLGLMM()` function, which enables the flexibility to use non-genetic variance component information while yielding feasible computation and memory efficiency.

tape icon tape

Test with Adjusted Phenotype and Empirical saddlepoint approximation in linear mixed model (TAPE) :radio:

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