Comments (2)
Fixed an issue, when LP solver functionality check depended on libSBML. Now LP solver is tested by loading the model from empty.mat, thereby circumventing libSBML.
Commit 64eb65e
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The solver choice is now set to 'none' if there are no working LP solvers available. Also added 'cobra' as the third choice for setRavenSolver.
Commit 511867c
from raven.
Related Issues (20)
- problematic use of RAVENSOLVER global in optimizeProb HOT 2
- feat: importYaml and exportYaml functions HOT 9
- There is an error in the old tINIT function (runtINIT) in the newest RAVEN version HOT 2
- findGeneDeletions canβt work HOT 14
- CheckTasks doesn't work HOT 1
- The meaning of output parameters of FSEOF HOT 8
- help: randomSampling with human-GEM HOT 10
- changeGeneAssoc not work if all the gene already are in the model
- bug: on Apple silicon CPU getDiamond fails HOT 4
- Failed to make blastp executable HOT 4
- fix: addRxns definition of `rev` field
- chore: update tINIT references HOT 3
- solveLP() does not work because of issue in code HOT 6
- RAVEN >= v2.7.7 getModelFromHomology generates invalid GPRs from Recon3D HOT 3
- Error: ftINIT - failed to find good enough solution within time frame HOT 14
- help: getKEGGModelForOrganism gives error when using dispEM HOT 1
- bug: RAVEN 2.8.2 checkInstallation on new install
- bug: model loaded from YAML has no c-field
- bug: soplex reported failure, even when functional
- SBO terms not exported properly to Excel format when they are within MIRIAM annotations HOT 5
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