Comments (2)
Hi Gemma,
Great question! I haven't try C.Origami on data other than Hi-C, but I think it should work the same.
Jimin
from c.origami.
Thanks for the quick replay. Glad to know that. I will try it and let you know if it works. Thanks again!
from c.origami.
Related Issues (20)
- How to merge the predicted matrix and convert it back to valid pairs ? HOT 2
- `examples/prediction.sh` generates blank Hi-C image for chromosome 15 HOT 2
- Request for evaluation code HOT 2
- Questions about performance comparison with deepC HOT 2
- About comparison with Original HiC matrix HOT 3
- The pre-trained models of other cell types HOT 1
- What method was used in the paper to convert the predictions into valid pairs? HOT 1
- Single-cell ATACseq adaptability HOT 1
- How to balance mcool files. HOT 1
- Using CTCF chip-exo without input HOT 5
- reproduce HOT 4
- insulation score HOT 5
- How to makr trans interaction contacts prediction? HOT 5
- Adding different ChIP-seq during the training phase ? HOT 1
- A problem in the PositionalEncoding model code HOT 3
- Independant chance of returning sequence complement HOT 4
- Training and prediction at 5kb resolution HOT 2
- Issues with Training the C.Origami Model Using Only Sequence Data and Integrating Multi-Species Data
- Issues with Training the C.Origami Model Using Only Sequence Data and Integrating Multi-Species Data HOT 4
- GRAM importance score HOT 2
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