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Name: Tim Vaughan
Type: User
Name: Tim Vaughan
Type: User
Command-line interface to some basic Biopython alignment manipulation functions.
Bacterial phylogenetics in BEAST 2.
Bang! Adding Turing Completeness to your config files since 2020.
Lectures I gave for a Bayesian statistics minicourse at the University of Hohenheim.
Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data
Modified implementation of the BDMM multi-type birth-death model for BEAST 2.
Some basic m4 macros for BEAST 2 XMLs
Bayesian Evolutionary Analysis by Sampling Trees
GUIs for BEAST using Java FX to make things more pretty.
Experimental Django-powered BEAST 2 package repository
Lecture slides for bioinf702
Easily load R scripts provided by BEAST 2 packages.
releases of beast2 packaged zip files in a reliable location
Talks presented at the 2018 Workshop on Population and Speciation Genomics, Cesky Krumlov
Graphical construction and modification of BEAST 2 XML files.
Simulation of ARGs under coalescent with gene conversion
BEAST 2 package for performing inference on epidemiological parameters using the exact likelihood.
Tasty additions to BEAST 2
Automatically exported from code.google.com/p/figtree
Command shell interface for HDF5 scientific data files.
Rough visualisation of classical mechanics in tree space
Instructions and data for student mini-project at the 2018 C3BI course on molecular phylogenetics.
Lecture for C3BI workshop in HK, 2018
Browser-based BEAST log file analyzer.
An extremely simple browser-based multiple sequence alignment viewer.
Browser-based utility for phylogenetic tree visualisation.
Java implementation of my non-interactive phylogenetic tree painter.
Basic graphical JSON object heirarchy browser
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.