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apptainer-docker

Docker image for Apptainer

autotiptrack

A software algorithm for the automated analysis of in vitro gliding motility assays.

bia-bob

BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.

biapol-blog

Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at the TU Dresden. We blog about image data science, knowledge exchange and research data management in the life sciences.

bioimageanalysisnotebooks

Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more

cle_astype_int_issue

minimal example for pyclesperanto_prototypes cle_image.astype(int) issue

clesperanto_container

clic_prototype

GPU-accelerated Image Processing library

devbio-napari

docker

Dockerfile templates for creating RAPIDS Docker Images

docs

Mattermost documentation

docs-1

The open-source repo for docs.github.com

flexget

The official FlexGet repository

fundamental_energy

Code for re-creating figures for "Fundamental energy cost of finite-time parallelizable computing"

iphotophotoslibrary2xmp

This python3 script extracts ratings and keywords (including faces) from an Apple iPhoto or Photos library and saves them to an .xmp file that can be used by other software such as darkroom.

jdlbot

Automate downloads with RSS, jDownloader and jDlBot!

libreelec.tv

Just enough OS for KODI

mediawiki-to-gfm

Converts Mediawiki format to Github Flavoured Markdown format

my_image_analysis_notebook

n2v

This is the implementation of Noise2Void training.

napari-microscope-gym

napari-n2v

A self-supervised denoising algorithm.

napari-workflows

nerfstudio

A collaboration friendly studio for NeRFs

pyclesperanto_prototype

GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data

rapids_singlecell

Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.

scikit-learn-mooc

Machine learning in Python with scikit-learn MOOC

singularity-userdocs

User Documentation for SingularityCE.

time-series-library

A Library for Advanced Deep Time Series Models.

training-material

A collection of Galaxy-related training material