Comments (2)
I converted from hunalign ladder-style to the bleualign format. I believe this is the code I used:
def reformat(ladder_file, src_len, tgt_len):
alignments = []
current_alignment = ([], [])
prev_a1, prev_a2 = None, None
for line in open(ladder_file, 'r', encoding='utf-8'):
fields = line.strip().split('\t')
a1, a2 = int(fields[0]), int(fields[1])
if a1 != prev_a1 and a2 != prev_a2 and current_alignment != ([], []):
alignments.append(current_alignment)
current_alignment = ([], [])
current_alignment[0].append(a1)
current_alignment[1].append(a2)
prev_a1, prev_a2 = a1, a2
alignments2 = []
xx, yy = [], []
for a1, a2 in alignments:
x1 = sorted(list(set(a1)))
x2 = sorted(list(set(a2)))
alignments2.append((x1, x2)) # tuple of lists
xx.extend(x1)
yy.extend(x2)
# add deletions/insertions (*not* in order)
xx, yy = set(xx), set(yy)
for x in range(src_len):
if x not in xx:
alignments2.append(([x, ], []))
for y in range(tgt_len):
if y not in yy:
alignments2.append(([], [y, ]))
return alignments2
from vecalign.
@thompsonb can you please upload the corpuses with their corresponding alignment files on the repo ?
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