Comments (1)
Hi @wu-yc ,
Thanks for your interest in our study. The current version of pMTnet is not able to make predictions without antigens. We are developing a more advanced version that would be able to do the task.
Tianshi
from pmtnet.
Related Issues (20)
- TCR_encoder_30.h5 and other trained models in the repo HOT 1
- tensorflow.python.framework.errors_impl.InvalidArgumentError: input and filter must have the same depth: 76 vs 30 HOT 4
- A bug may be in pMTnet HOT 2
- Labelled training data used in pMTnet HOT 5
- Strange characters in the testing_data.csv and training_data.csv HOT 1
- HLA Pseudosequence generation HOT 3
- Full TCR sequences of validation data HOT 2
- Layer lstm_2 will not use cuDNN kernels since it doesn't meet the criteria. HOT 4
- Prediction with unknown HLA HOT 2
- Retrain Model pMTnet HOT 3
- How to calculate the AUC?
- How to filter the result by Rank HOT 1
- What does the negative rank mean HOT 1
- about the testing data
- Request for the support of MHC II molecule like "DRA1*02:01" HOT 2
- Understanding the model predictions- not CDR3 rank not influenced by HLA or peptide HOT 1
- Build my own background TCR HOT 2
- About Training TCR_encoder
- Error Predict Score on Neg_10k Data
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from pmtnet.