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abcd-dicom2bids

For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.

bachik23

blockanesthesia

Code for the Block Anesthesia study

brain-networks-course

Repo for Brain Networks course

cbig

cheatsheets

Official Matplotlib cheat sheets

coco2019-training

Training materials for the ReproNim day at https://coastal-coding.github.io

cpacadventures

datalad_demo

fmri_demo

fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

heudiconv

A flexible DICOM converter for organizing brain imaging data into structured directory layouts

introduction_to_ml_with_python

Notebooks and code for the book "Introduction to Machine Learning with Python"

kessler

labs

notebooks for interactive learning

learn-python3

Jupyter notebooks for teaching/learning Python 3

longitudinalrestuicl

Codes for the longitudinal resting-state analysis from the UICL study. Read preprint: https://www.biorxiv.org/content/10.1101/2021.02.09.430381v1

mergeatlas

merging atlases

mind18_rsa_tutorial

Tutorial on representational similarity analysis for MIND 2018

misc

mml-book.github.io

Companion webpage to the book "Mathematics For Machine Learning"

nicegroupplot

nimg_core

Tools and scripts for neuroimage processing

nipype_tutorial

Learn Nipype with these tutorial notebooks - go here to see them online -->

olearyvaidyalab-uicl

Code for the University of Iowa College Life study

r4ds

R for data science: a book

schedule

scikit-learn-videos

Jupyter notebooks from the scikit-learn video series

shell-novice

Software Carpentry introduction to the shell for novices.

test