timnugent Goto Github PK

bandit-algorithms

Epsilon-greedy, softmax and LinUCB contextual bandit implementations [recommender systems]

blt-contracts

Blocto Token Smart Contracts

celeste

Identify clouds in images using support vector machines for enhanced panoramic stitching [machine learning][photography]

drawtransmembane

Perl modules for drawing cartoon and schematic representations of transmembrane proteins [bioinformatics]

ethereumbook

Mastering Ethereum, by Andreas M. Antonopoulos, Gavin Wood

film3x

Modification of FILM3 algorithm to incorporate membrane potential term [bioinformatics]

gtimelapse

Linux application for capturing timelapse videos [photography]

hhlipex

Lipid exposure prediction using support vector machines and hhblits profiles [machine learning][bioinformatics]

jglcov

Sparse inverse covariance estimation using the joint graphical lasso [bioinformatics][statistics]

justice-is-digital

kernel-density

Multivariate kernel density estimation [statistics]

kpca-eigen

Kernel principal component analysis using the Eigen linear algebra library [machine learning]

kridge-regression

Kernel ridge regression and OLS tools using the Eigen linear algebra library [statistics]

logistic-regression-sgd

L1-regularized logistic regression using stochastic gradient descent [machine learning]

memembed

Membrane protein orientation using a genetic algorithm and knowledge-based statistical potential [bioinformatics]

memsat-svm

Transmembrane protein topology prediction using support vector machines [machine learning][bioinformatics]

naive-bayes

Naïve Bayes classifier with gaussian, multinomial and bernoulli decision rules [machine learning][statistics]

neural-net

Backpropogation artificial neural network using stochastic gradient descent [machine learning]

pdb-complex

Generate and compare graphical representations of protein complexes [bioinformatics]

pideck

Setup scripts for PiDeck

psicov-dirichlet

Modified version of PSICOV algorithm, replacing pseudocounts with dirichlet priors [bioinformatics][statistics]

smart-order-router

spectral

Spectral clustering using K-means and a radial basis function kernel matrix [machine learning]

svd-recommend

Singular Value Decomposition-like matrix factorization for collaborative filtering [recommender systems]

true-clinical

Improving data transparency in clinical trials using blockchain smart contracts [blockchain]

uniswap-v3-liquidity-math

Code examples for the technical note "Liquidity Math in Uniswap v3"

wrapup

Skeleton for wrapping a C/C++ Library in Python