tomdeman-bio Goto Github PK
Name: Tom de Man
Type: User
Company: MilliporeSigma
Location: Apex, North Carolina
Name: Tom de Man
Type: User
Company: MilliporeSigma
Location: Apex, North Carolina
Bash one-liners useful for bioinformatics
BWK awk modified for biological data
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
Converts BIOMIC MIC and zone diameter data to the Starlims format.
CLI Sequence Search Tool for Antimicrobial Resistance
Scripts for generating and comparing gene databases with each other
Estimate the core genome size for a group of isolates
A simple workflow for processing 16s sequence data with DADA2
Research output storage
Determines the codon usage for each amino acid for a single sequence
Bacterial assembly and annotation pipeline
Small utility scripts for GLIMMER output
A resistome profiler for Graphing Resistance Out Of meTagenomes
Scripts that deal with HMMer output
Utility scripts for interproscan output
KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
Repository for storing metagenomics workflows
Scripts for handling WGS SNP data
Code, unit tests, and tutorials for running PICRUSt2
Converts PLACNET output to a FASTA file containing plasmid contigs
Pull genes of interest from Prokka genome annotation output
Pipeline designed to analyze short reads for Quality, Assembly, Identification, Sequence_typing, Annottation, and Resistance_mechanisms for Hospital acquired bacterial infections
Containerized version of QuAISAR
Scripts for handling SAM files
Pipeline for HLA typing from RNA-Seq data
Random utility scripts for genomics data
Antimicrobial resistance gene predictor
Tiny shell scripts for various tasks
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.