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2022-i590snpproject-ns

This repository contains codes and documentations for the SNP project. Class of Fall 2022

amazon-reviews

NLP project on the scores given for a review

bamsurgeon

Tools for adding mutations to existing .bam files, used for testing mutation callers. Updated to decrease runtime

bghandbook

Handbook for Brendel Group students, postdocs, and staff

bgsingularityhub

A portal to our collection of Singularity/Apptainer definition and image files

codefmab

code and supplementary documents supporting the FMAB book project

csci-b-657-computer-vision

data-cleaning-rmotr-freecodecamp

freecodecamp-intro-to-numpy

freecodecamp-pandas-real-life-example

gostripes

Computational workflows for STRIPE-seq data analyses

i519-bioinformatics-fall2022

intro-to-dl

Resources for "Introduction to Deep Learning" course.

intro-to-rnaseq-hpc-o2

This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster

kaggle_belka

Git repository for Kaggle competition, Belka dataset

markov-chain

Package to plot markov chain in python

pepnet

Copy of PepNet - The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra

rbo-rank-genelist

This is an implementation of modified RBO in the case of ranking gene lists.

rdp-reading-data-with-python-and-pandas

vanvalenlab-intro-to-deepcell

An introduction to deepcell and deep learning