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Thomas Shafee's Projects

alignstat icon alignstat

A tool for the statistical comparison of alternative multiple sequence alignments

cysbar icon cysbar

A python tool for alignment of cysteine rich proteins

defspace icon defspace

A Shiny Rstudio application for exploring defensin sequence space

defspaceshiny icon defspaceshiny

A Shiny Web-application for exploring defensin sequence space

flannotator icon flannotator

A set of functions for annotation of Fasciclin-like Arabinogalactan sequences

latrobot icon latrobot

A set of scripts in R to disambiguate and add open data from La Trobe University to Wikidata

openvirus icon openvirus

aggregation of scholarly publications and extracted knowledge on viruses and epidemics.

ragp icon ragp

Filter plant hydroxyproline rich glycoproteins

rblast icon rblast

Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package

scholar icon scholar

Analyse citation data from Google Scholar

seqspace icon seqspace

An R tool for making quantitative maps of protein sequence space

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