Comments (2)
The magic mock stuff is there so that you don't have to build extension modules on RTD. This is an issue for msprime, because it depends on GSL. I'd remove all the modules you have in the mock list except msprime and see what happens. You need to add a requirements.txt for the ones that will work.
I doubt it'll work unless you have tskit installing on RTD at the least anyway.
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requirements.txt!! Thanks; got it!
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Related Issues (20)
- recapitating merged trees HOT 9
- add VCF example to tutorial
- recapitate has surprisingly small diversity if WF simulation is started and saved in `late` HOT 7
- release tasks
- tsinfered tree sequences don't have 'type' key in top-level metdata but `set_tree_sequence_metadata` expects they do
- provide example of annotating existing mutations
- test on annotating tsinfer'ed tree sequence
- recapitation root time auto-adjust fails with root times > 1e5, resulting in an `msprime.InputError` HOT 2
- release tasks
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- AttributeError in jsonschema HOT 3
- edges are lost from tree sequence after SLiM step HOT 6
- Potential to use .frequencies() method in /tutorial.html
- update quickreference list at top of docs
- default sex ratio 0.0 HOT 1
- Discrepancies in diversity after recapitation and mutation overlay HOT 1
- Recapitation for complex demography with populations that died out HOT 11
- Strange warning in recapitation HOT 2
- Typo in `recapitate` function docstring HOT 1
- :meth: is not working in documentation HOT 1
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