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5908_frc2019

adamacs

Architectures for data management and computational support. This is the central database architecture for the collaborative research center of the SFB1089.

aeon_mecha

Project Aeon's main library for manipulating raw, acquired data. Includes preprocessing, querying, and analysis modules.

arsenylab_dj_cloud

blog

caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

canonical-colony-management

Canonical Colony-Management pipeline developed under the U24

canonical-ephys

Canonical ephys pipeline package - development under U24

canonical-full-ephys-pipeline

Full ephys pipeline using the canonical lab, colony and ephys modules

canonical-full-imaging-pipeline

Full imaging pipeline using the canonical lab, colony and imaging modules

canonical-imaging

Calcium imaging DJ "element" pipeline

canonical-lab-management

Canonical Lab-Management pipeline developed under the U24

canonical-utils

chen-2017

Data Pipeline for paper Chen, 2017

datajoint-docs

datajoint-elements

DataJoint Elements is a collection of curated computational workflow for neurophysiology experiments.

datajoint-neuroglancer

datajoint-nwb-showcase

A project showcasing published datasets with matching DataJoint pipelines and NWB 2.0 export

datajoint-python

Relational data pipelines for the science lab

datajoint-tutorials

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

datajoint-utilities

A general purpose repository containing all generic tools/utilities surrounding the DataJoint ecosystem. These can be candidates for DataJoint plugins

datajoint_interface

db-programming-with-datajoint

A series of notebooks accompanying video tutorials

dev_spyglass

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

dj-docs

Documentation of datajoint @ Kavli Institute

dj-search

Utility to perform string searching on DataJoint schemas/tables

dj_s1alm

DataJoint schema for S1ALM project

djlabhub-docker

A docker image optimized for deploying to JupyterHub a JupyterLab environment with DataJoint Python.

djpyplugin_nwb

NWB attribute adapter plugin for DataJoint

ecephys_spike_sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes