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awesome-machine-learning

A curated list of awesome Machine Learning frameworks, libraries and software.

c_tools

bioinfo tools use C language

chatgpt_academic

科研工作专用ChatGPT拓展，特别优化学术Paper润色体验，支持自定义快捷按钮，支持自定义函数插件，支持markdown表格显示，Tex公式双显示，代码显示功能完善，新增本地Python/C++/Go项目树剖析功能/项目源代码自译解能力，新增PDF和Word文献批量总结功能/PDF论文全文翻译功能

coding-style

安居客代码规范

consensus

This is a tool to rmdup the the bam by index in reads,use Rustlang.

cpp_primer_answers

《C++ Primer》第五版中文版习题答案

cyvcf2

cython + htslib == fast VCF and BCF processing

document-style-guide

中文技术文档的写作规范

fastqc

A quality control analysis tool for high throughput sequencing data.I increased the statistics for Q20 and Q30

flaskr

just a flaskr

fqcheck

A simple tool to check a pair fastq is unchartered or not.

ml_learn

some demo script to learn ML

mutview

MutView is a tool to look the reads cover a mutation in bam file, output file is html format, just like a lightweight IGV(Integrative Genomics Viewer).

my_vim_config

nucleus

Python and C++ code for reading and writing genomics data.

plot_coverage

a simple demo script to get genome coverage plot (samtools depth outfile as input).

rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

smart-variant-filtering

stat_mut_sampleratio

stat_samtools_depth

A simple tool to stat the pos number with different depth from samtools depth result file. The result can be easy used to get the coverage norm.

svtyper

Bayesian genotyper for structural variants

vcf_stat

vim-init

轻量级 Vim 配置框架，全中文注释

wegene_weijiedu_example