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99-problems

This is an adaptation of the Ninety-Nine Prolog Problems written by Werner Hett.

ads1-slides

Slides for Algorithms for DNA Sequencing Coursera class

algorithms

Minimal examples of data structures and algorithms in Python

antonie

Antonie is an integrated, robust, reliable and fast processor of DNA reads

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

bio-playground

miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.

build-linux

bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

bx-python

Tools for manipulating biological data, particularly multiple sequence alignments

cheerio

Fast, flexible, and lean implementation of core jQuery designed specifically for the server.

chitin

chitin: an awful shell for awful bioinformaticians

cockroach

A Scalable, Geo-Replicated, Transactional Datastore

colorful-image-colorization

A deep learning approach to colorizing images

command-line-text-processing

From finding text to search and replace, from sorting to beautifying text and more

competitive-programming

My solutions from different contests and online Judge.

cpu60

Example of CPU simulation in software

crud-php-simple

Simple Add, Edit, Delete & Display in PHP & MySQL

cursopatronesdiseno

Curso Taller de Patrones de Diseño en JAVA

d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

deseq2

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DESeq2.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=DESeq2.

effectivetensorflow

Tensorflow tutorials and best practices.

ejemplo-php-poo-mvc

fastq_2_fasta

genomewarp

GenomeWarp translates genetic variants from one genome assembly version to another.

gro-microcontroller

**ALPHA VERSION** Code running on bot's microcontroller (Arduino Mega 2560).

guava

Google Core Libraries for Java 6+

hello-worlds

ipython

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

ipyvolume

IPython widget for rendering 3d volumes and glyphs in the Jupter notebook