Comments (2)
Dear @santule,
There is an example of integrating trees and alignments, see here: http://alignment.hyphy.org/fna-viewer
Note that it uses a package called react-phylotree, which is a React component that uses phylotree.js under the hood.
Let me know exactly what kinds of visualizations you had in mind and I will do my best to show what's possible.
Best,
Stephen
from alignment.js.
Thanks, @stephenshank for your prompt reply. And apologies for the delay in reply from my side.
I am hoping to integrate the full functionality of phylotree.js along with some minor add-on functionality from my side (i.e. color nodes, collapse nodes, show node annotation, etc.) and then also include all of the alignment.js functionality. I have index.html with all the required phylotree.js functionality built and ready. On this file, I want to add the alignment.js too. Is that possible to do?
Regards and Thanks,
from alignment.js.
Related Issues (16)
- Case sensitivity HOT 1
- [Safari] Scrolling fails HOT 1
- Automatically detect amino acid alignments
- Slight format change request HOT 1
- Command line tool for prototyping alignment.js widgets
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- Sequence Logos
- Large tree and guide tree components with React phylotree
- Highlight FASTA parser in documentation
- Allow alignment to be used with node HOT 1
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- standalone javascript library HOT 2
- Fasta Viewer Imported Into React App Issue HOT 6
- Tree And MSA Not Aligning As Expected HOT 4
- Fix webpack
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from alignment.js.