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Veit Schwämmle's Projects

crosstalkmapper icon crosstalkmapper

R scripts to create crosstalk maps that visualize multi-layered proteoform data

edamontology icon edamontology

EDAM is an ontology of bioscientific data analysis and data management. EDAM concentrates on topics, operations, types of data, and data formats related to analysis, modelling, optimisation, and data life-cycle in biosciences, and in other research and science-based applications.

massspecpipeline icon massspecpipeline

To provide a fast way to extract the necessary things from .raw MS files from MaxQuant data

modules icon modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

pmultiqc icon pmultiqc

A library for QC report based on MultiQC framework

sdrf-pipelines icon sdrf-pipelines

A repository to convert SDRF proteomics files into pipelines config files

searchgui icon searchgui

Highly adaptable common interface for proteomics search and de novo engines

setup-snr icon setup-snr

Step by step how-to on setting up snr and providing the required files

shic icon shic

shic is a collection of shims for use in automated workflow composition

test-datasets icon test-datasets

Test data to be used for automated testing with the nf-core pipelines

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