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ac-pca

AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation

annotationquery-pubmed

Experiment using Elsevier Labs' Annotation Query library to query annotations of PubMed articles. The code is in Scala and leverage SPARK processing. The annotations for the articles are extracted from PubTator and Stanford Core NLP.

berkeleytextbooks

Textbooks (EE)CS majors at Berkeley would find helpful

ceia-rl-tournament-starter

Example training/testing scripts for our soccer-twos-env.

denovowest

iclr19-graph2graph

Learning Multimodal Graph-to-Graph Translation for Molecular Optimization (ICLR 2019)

jdf

Joyner Document Format official

ml_bias

Detection and mitigation of confounding bias in machine learning

scipdf_parser

Python PDF parser for scientific publications

sentsci

Scientific sentence tokenizer

soccer-twos-env

A Python package to wrap a compiled soccer-twos reinforcement learning environment with gym-compatible interfaces.

vgainullin.github.io

website

wetlab_server_html