Comments (1)
Also closed via pileup/call. We can continue this discussion in that context.
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Related Issues (20)
- vg giraffe can crash in the Banded Global Aligner HOT 16
- vg has crashed
- Release vg v1.54.0
- stuck in the autoindex command around three days HOT 5
- Discrepancy in SV Counts between vg deconstruct and Input SV Data
- vg genotype HOT 8
- questions on path cover haplotypes and haplotype sampling HOT 2
- vg: src/constructor.cpp:2230: void vg::Constructor::construct_graph(const std::vector<FastaReference*>&, const std::vector<vcflib::VariantCallFile*>&, const std::vector<FastaReference*>&, const std::function<void(vg::Graph&)>&): Assertion `reference_for.count(fasta_contig)' failed. HOT 1
- vg grep the none-reference sequence from the Minigrah-Cactus result? HOT 3
- error [vg call]: No reference paths found HOT 5
- I have a question about GAM to BAM. HOT 1
- VG chunk help
- Erro in vg index step cannot get the gbwt result HOT 1
- error [vg call]: No paths with selected reference sample HOT 2
- Studying allele-biased expression with VG HOT 2
- VG has crashed
- Multithreading (option "-t 20" ) does not work in vg giraffe. HOT 4
- I have a question about vg's GAM file. HOT 4
- Is there a way to chunk the gam file every 500kb length without entering the "path range" manually?
- Deletions at start of CIGAR sequences HOT 8
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