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api

A place to flesh out the python API the CCI will provide for large scale image processing.

aslprep-wrap

bedpostx_app

Build for docker and singularity containers for bedpostx

cachecontrol

The httplib2 caching algorithms packaged up for use with requests.

cubids

Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

dax

Distributed Automation for XNAT

dax-opsdashboard

Dashboard for DAX Ops

dax_bids

dax_docker

dax_spiders

dax_templates

dax_yaml_processor_examples

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

dcm4che---custom-tools

demo-singularity-matlab-fsl

demo-singularity-spm-freeview

dtiqa_app

Build for docker and singularity containers for dtiQA

examcardtotxt

fmriqa_app

Build for docker and singularity containers for FMRIQA

gstudy-support

hello-world-mcr

Test code for generating containers using Singularity and Matlab compiler.

ldax

ldax_templates

mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

multi-atlas-v3.0.0

multi_atlas_app

Build for docker and singularity containers for Multi Atlas

powertrain

Large scale image processing infrastructure

psql_xnat_tools

psycoxnat

Experimentation of XNAT objects with postgres

pycap

REDCap in Python