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Wael Mohammed's Projects

breast-cancer-screening icon breast-cancer-screening

Budget impact analysis for a breast cancer screening program - Center for Drug Policy and Technology Assessment at KHCC

calibr icon calibr

CalibR provides tools for the calibration of decision-analytic models

cdx2cea icon cdx2cea

CDX2 biomarker testing and adjuvant therapy for stage II colon cancer: An exploratory cost-effectiveness analysis

docker-repast-hpc icon docker-repast-hpc

This repo contains the instructions to generate docker-powered Repast for High-Performance Computing development environments. The dockerfiles employ Ubuntu 22.10 and Alpine 3.16.2 as base layers for the Repast HPC 2.3.1.

example-dissertation icon example-dissertation

R Markdown template for a dissertation or thesis, inspired by GitHub users yihui, rosannav, and brianhigh

heromod icon heromod

An R package for running cost-effectiveness models in R. Forked from the heemod package.

intro-pmcmc icon intro-pmcmc

Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.

mhadaptive icon mhadaptive

R package for general Metropolis Hastings sampling

neuroblastomapsm icon neuroblastomapsm

The NeuroblastomaPSM (Neuroblastoma Partitioned Survival Model) package documents the cost effectiveness of Dinutuximab Beta (Qarziba®) for the treatment of high-risk neuroblastoma patients after stem cell transplantation.

posts icon posts

This repo will host files linked only to some posts in my blog. While many posts would be linked to existing repositories, those that do not will have their files stored in this repository for readers' reference (including my primary audience, future me).

r-handbook icon r-handbook

A handbook on the use of R for decision modeling

shinypsa icon shinypsa

ShinyPSA provides a barrage of functions to aid in summarising the outputs of probabilistic sensitivity analyses (PSA) of Health Economic Decision-Analytic Models (HEDAM)s. It also ships with a handy shiny application that eases the process of manipulating the outputs of the functions. This shiny application is also hosted on `shinyapps.io` should you want the functionality but not the package (see link below).

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