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advanced_analytics_kul

Repository for KUL course advanced analytics in Business

crup

CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.

customcontamination

a list of custom contaminants.

github-actions

Play around with github actions

hic-pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

htseq-clip

a toolset designed for the processing and analysis of eCLIP/iCLIP dataset

lcd-show

2.4" 2.8"3.2" 3.5" 5.0" 7.0" TFT LCD driver for the Raspberry PI 3B+/A/A+/B/B+/PI2/ PI3/ZERO/ZERO W

ngsstuff

pycoqc

pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)

rattle

Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

slurmgoggles

Monitor your high performance infrastructure configured over slurm using TIG stack

snakemake

This is the development home of the workflow management system Snakemake. For general information, see

snakemake-executor-plugin-slurm

A Snakemake executor plugin for submitting jobs to a SLURM cluster

supptables_thesis

Supplementary tables that won't fit in the thesis. doc.

umi4cats

An R package for analyzing UMI-4C chromatin contact data.

warddeb

wd40

Stuff to make my life easier.

wf-alignment

wf-single-cell