Related Issues (20)
- How to handle read options (e.g. like `ReadFastaOptions`)
- How to load pairs of FASTQ files from paired-end reads HOT 7
- Update https://www.wheretrue.dev/ w/ Trimming Example
- alternative for `seqkit locate` that can locate subsequences/motifs HOT 12
- Reduce Dependencies HOT 3
- Random subsampling of reads from BAM files HOT 5
- merge paired-end sequences HOT 5
- Loading in of large BAM files HOT 5
- Integer Encoding
- Support reading BED files with less than 12 column. HOT 4
- name column in BED file is limited to 255 bytes. HOT 6
- Update user docs for new BED options HOT 1
- Investigate granges rust crate HOT 4
- Why is specifying the extension required when reading files? HOT 2
- Infer extension and compression from file path.
- Fastq files are not fully read HOT 10
- Why different handling between GFF and mzml/genbank in polars. HOT 4
- `FastaReader` returns empty pandas dataframe HOT 8
- Releases builds failing. HOT 1
- How to run polars dataframe methods on large FASTQ files in a memory efficient way HOT 5
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