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Wu lab @UVA's Projects

amphora2 icon amphora2

An Automated Phylogenomic Inference Pipeline for Bacterial and Archaeal Sequences.

fastani-rebuttal icon fastani-rebuttal

R Code to reproduce results in the Nature Communication paper: Murray, C.S., Gao, Y. & Wu, M. Re-evaluating the evidence for a universal genetic boundary among microbial species. Nat Commun 12, 4059 (2021). https://doi.org/10.1038/s41467-021-24128-2

microsad icon microsad

An open-source R package designed for testing Species Abundance Distribution (SAD) models within microbial communities.

phyla_amphora icon phyla_amphora

A Phylum-specific Automated Phylogenomic Inference Pipeline for Bacterial Sequences.

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