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Jessica Wu's Projects

compbio icon compbio

Python libraries and utilities for computational biology

dlcoal icon dlcoal

Modeling gene duplication, loss, and coalescence

dlcpar icon dlcpar

Modeling gene duplication, loss, and coalescence (through parsimony)

ete icon ete

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

treefix icon treefix

Statistically informed gene tree error correction using species trees

viralrecon icon viralrecon

Assembly and intrahost/low-frequency variant calling for viral samples

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