Comments (3)
Hi Damien,
Thanks for letting me know. I can confirm that these messages are not errors from your scripts, but they serve as indications of certain functional categories of genes that do not have at least 2 rare variants to form a variant set. Please feel free to go ahead; this will not interrupt the next steps.
Best,
Xihao
from staarpipeline-tutorial.
That is inspiring! Thanks so much for your reply.
from staarpipeline-tutorial.
You're very welcome, Damien!
from staarpipeline-tutorial.
Related Issues (20)
- fitnullmodel error HOT 8
- Questions/issues in "Step 1: Fit STAAR null model" HOT 2
- Error in Gene_Centric_Coding analysis HOT 5
- Step 3.2: Gene-centric noncoding analysis HOT 9
- "Coding mask" AND "Noncoding mask" HOT 5
- RESULT: gene centric coding HOT 5
- "CSV error" when running Annotate.R HOT 5
- Small number of variants are passed for analysis HOT 9
- About rank-based inverse normal transformation HOT 4
- Questions about individual analysis results HOT 2
- Question about the results of Dynamic_Window_SCANG() and Dynamic_Window_Results_Summary() HOT 7
- Running staarpipeline docker image HOT 1
- run this pipline in crop population HOT 2
- STAAR sliding window errors HOT 4
- GENESIS null model not working HOT 3
- No known loci for conditional analysis? HOT 1
- Expected input Parameters for Gene Centric Coding Step HOT 3
- Lack of Input Examples for running STAARpipeline HOT 1
- Number of jobs HOT 2
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from staarpipeline-tutorial.