xmuyulab Goto Github PK

63_immune_cells

Gene expression profiles of 63 immune cell types

aquila

Detection of low abundance foodborne pathogens

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bpformer

Tracing the Origins of Unknown Tumors Using Pathway-based Transformer Model

bwa-mem2

The next version of bwa-mem (WIP; not recommended for production uses at the moment)

camelyon

The solution to cameyon16 and camelyon17 challenge and also to your own WSI data project.

clever-xmbd

compression-benchmark

compression-benchmark-tools

covid-19_fda_app-a-thon

covid19

🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.

daiscom

daism-xmbd

Highly accurate cell type proportion estimation with in silico data augmentation and deep neural networks

dca

Deep count autoencoder for denoising scRNA-seq data

dctd_team_aginome-xmu

Team Aginome-XMU submission to DREAM Challenge Tumor Deconvolution

deeplearning-models

A collection of various deep learning architectures, models, and tips

deeplift

Public facing deeplift repo

dge_workshop

diamond

A Multi-modal DIA Mass Spectrometry Data Processing Pipeline

diann

DIA-NN - a fast and easy to use tool for processing data-independent acquisition (DIA) proteomics data

dice-xmbd

Deep learning-based cell segmentation tool for imaging mass cytometry

dreamdia-xmbd

Software for data-independent acquisition (DIA) proteomic data processing with deep representation features.

g2p-aggregator

Associations of genomic features, drugs and diseases

gene_lists

List of gene lists for genomic analyses.

gitignore

A collection of useful .gitignore templates

gpf

Genome Programming Framework(GPF)

hedgehog-lab

Run, compile and execute JavaScript for Scientific Computing and Data Visualization TOTALLY TOTALLY TOTALLY in your BROWSER! An open source scientific computing environment for JavaScript TOTALLY in your browser, matrix operations with GPU acceleration, TeX support, data visualization and symbolic computation.

htslib

C library for high-throughput sequencing data formats. This is not the official repository for htslib.

idepa-xmbd

IDEPA-XMBD has evaluated five state-of-the-art individual-level DEAs tools through classic computational and functional criteria.

imc-crlm