yhoogstrate Goto Github PK
Name: Youri Hoogstrate
Type: User
Company: ErasmusMC
Location: The Netherlands
Name: Youri Hoogstrate
Type: User
Company: ErasmusMC
Location: The Netherlands
Generate Lorenz plots and Coverage plots directly from BAM files
Official landing place of the bio-kernel project
Conda recipes for the bioconda channel.
Terminal based "The Matrix" like implementation
Disc-Art - some kind of omics artifact analyser
:mask::loudspeaker: Dr. Disco: detecting genomic breakpoints of fusion transcripts in random hexamer RNA-seq data
README how to upload seq data into EGA
Free open-source tool to extract counts of spliced EGFR vIII / EGFR non-vIII (wt) reads
toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting...)
fibronectin-splice-variant-detector
:honeybee: Fragment Location Annotation Identification Mapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data
:dash::leopard: FuMa: reporting overlap in RNA-seq detected fusion genes
Data intensive biology for everyone.
Galaxy RNA workbench
Examples and data for geom_net
GLASS-NL RNA-seq
glass-od
gsam
Application to mix idat files (e.g. tumor with normal)
Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences
attempt to parallelize mplileup
Modified fork of "Python-based preprocessing software for Illumina methylation arrays"
Python 3 API and batch downloader/re-runner for the MolecularNeuropathology brain classifier
Recursive correlation based natural clustering (using ggplot, labels and historgrams)
Scripts for single-cell 'omics analysis
single-cell and single-nucleus RNA-seq analysis of public data
Workflows for the processing of public and in-house spatial and/or single cell/nucleus RNA-seq glioma datasets
:triangular_ruler: segmentation-fold: RNA folding including K-turns
Toolkit for processing sequences in FASTA/Q formats
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.